E
- Earl Grey School
- Earl Oxford Middle School
- East Selkirk Middle School
- Ebb and Flow School
- Edmund Partridge Community School
- Edrans Christian School
- Edward Schreyer School
- Ekfrid School
- Elkhorn School
- Elm Creek School
- Elmdale School
- Elmwood Elementary
- Elmwood High School
- Elton Collegiate
- Elwick Community School
- Emerado Centennial School
- Emerson Elementary - Emerson
- Emerson Elementary - Winnipeg
- Emmanuel Fellowship Christian School
- Erickson Collegiate Institute
- Erickson Elementary
- Eriksdale School
- Ethelbert School
- Evergreen Colony School